Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGEWLLAASVPL---------EQPWRGRAKLLKMAARAIDEALRGQPDLD----CTELPLLLCVAEGDRPG--------------------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERL------------LTSQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGD-------------------------GPNVFCHLGNDAGERAAALLSYRRVRAA |
| 1TQY Chain:A ((3-421)) | --RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGL--KADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAETAGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173966 for 3330 contacts (-52.2/contact) +
2D Compatibility (PS) -35408 + (NN) -8364 + (LL) 456
1D Compatibility (HY) 1600 + (ID) 2450
Total energy: -218132.0 ( -65.51 by residue)
QMean score : 0.411
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