Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGR----MRACLAAS-PEARRGFAAALGWLDW--------DQARPWVERLLASPEPLFRAIGLAACGMHRHD------------PGPALLSALGHADPAVLARAARTAGELRRR------DLMANIRAYRAHDDPSLRFWANWATAQMGD-------------EEALGPLRAFAGQPGPFQLPATMVLLAWQP--RDTSMAWI---RQLMQ-AADTRRIGIQATGLFGDPVAVP----WLIQQMRDE--SLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
2VGL Chain:B ((99-382)) | ------------------------------------------------------------------------NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94574 for 1627 contacts (-58.1/contact) +
2D Compatibility (PS) -24477 + (NN) -17103 + (LL) 6720
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -133284.0 ( -81.92 by residue)
QMean score : 0.242
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