Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGR----MRACLAAS-PEARRGFAAALGWLDW--------DQARPWVERLLASPEPLFRAIGLAACGMHRHD------------PGPALLSALGHADPAVLARAARTAGELRRR------DLMANIRAYRAHDDPSLRFWANWATAQMGD-------------EEALGPLRAFAGQPGPFQLPATMVLLAWQP--RDTSMAWI---RQLMQ-AADTRRIGIQATGLFGDPVAVP----WLIQQMRDE--SLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF
2VGL Chain:B ((99-382))------------------------------------------------------------------------NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPS


General information:
TITO was launched using:
RESULT:

Template: 2VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94574 for 1627 contacts (-58.1/contact) +
2D Compatibility (PS) -24477 + (NN) -17103 + (LL) 6720
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -133284.0 ( -81.92 by residue)
QMean score : 0.242

(partial model without unconserved sides chains):
PDB file : Tito_2VGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VGL-query.scw
PDB file : Tito_Scwrl_2VGL.pdb: