Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQRKA-VLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPLVQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVWFPITETTERVYRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFALRALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELYKRKEQDGILDPEHIAETYWQIHCQPRDCWVHELDLRPWMETF
3H7A Chain:B ((4-243))
-TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIID------------------------MPPAAVAGAYWQLYQQPKSAWTFEMEIRPY----
General information:
TITO was launched using:
RESULT:
Template:
3H7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173475 for 1813 contacts (-95.7/contact) +
2D Compatibility (PS) -22637 + (NN) -7248 + (LL) 2016
1D Compatibility (HY) -18400 + (ID) 5950
Total energy: -225694.0 ( -124.49 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3H7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H7A-query.scw
PDB file :
Tito_Scwrl_3H7A.pdb
: