Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MSLKWTRKAAAD-LDAIYDHYVVLI-GPEKALKAVQDIVEQV---KPLQQVANQGAGRPSEVPGVR----------TLTLERW---PFSAPFR-----VKGKEIQI-LRIDRV-------EITP-
3KZT Chain:A ((11-142))
ADVQANVSDSSRIEQEAIGMIEDFYEAYAASFMSTGKEALALGDSIKQKFLTKELIEKVDRLIEATDADPIIRAQDLGENDMKTLSVKHLNDNWYEVNYTSAKGSQYERAVSIPVRVVNVDGQYLIDDITPE
General information:
TITO was launched using:
RESULT:
Template:
3KZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34724 for 509 contacts (-68.2/contact) +
2D Compatibility (PS) -9914 + (NN) -1771 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -50559.0 ( -99.33 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_3KZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZT-query.scw
PDB file :
Tito_Scwrl_3KZT.pdb
: