Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQE-----QG---------QWY-------FQRY-----IQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDTADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 2YOG Chain:A ((4-199)) | -------------------------------------------------------DKKKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSMSNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNL-------NKTWCMNPDQGL---IKPDVVFYLNVPPNY----------IY-----------EKVETQKKIYETYKHFAH-----EDYWINIDATRK---IEDIHNDIVKEVTKIKVEPEEFNFLWS--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59729 for 1166 contacts (-51.2/contact) +
2D Compatibility (PS) -16829 + (NN) -6197 + (LL) 9016
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -78939.0 ( -67.70 by residue)
QMean score : 0.416
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