Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEG-NAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP
3MKM Chain:D ((7-309))---------------------------------------RKIILDCDPGHDDAIAIMMAAKHPA-IDLLGITIVAGNQTLDKTLING-LNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGDTGLDG-PVFEPLTRQAESTHAVKYIIDTLMAS-DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGA-YGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYI


General information:
TITO was launched using:
RESULT:

Template: 3MKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -141211 for 2860 contacts (-49.4/contact) +
2D Compatibility (PS) -32912 + (NN) -23216 + (LL) 2792
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -228147.0 ( -79.77 by residue)
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3MKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MKM-query.scw
PDB file : Tito_Scwrl_3MKM.pdb: