Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAARKVQITMKTPARRRVGLLLASLCLPLFAQAAETQPTHEFSLDNGLKVIVREDHRAPVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEASRVLRDLGAEENAFTTDDYTAYYQVLARDRLPVALEMEADRMAHLSLPVDQFKSEIEVIKEERRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDDLRHWYESWYAPNNATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKPLELAEPGERRLKLYVRTQLPNLIMGFNVPSLG---SSENPREVNALRLIGALLDGGYSARLASRLERGEELVAGASTYYDAFN-RGDSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGMVYEKDSIAAQASSIGQLESVGLSWKLIDQDLEALKAVTPDDIQKAARTYFTPSRLTLAQVLPVKAEEKEARHE |
3AMI Chain:A ((30-450)) | -----------------------------------AASTFETTLPNGLKVVVREDHRAPTLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAAMGGRDNAFTTRDYTAYYQQVPSSRLSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHPYRVPVIGWMNDIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDK---SRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRGQQGLFILEGVPSKGV--TIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQDSLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116923 for 3501 contacts (-33.4/contact) +
2D Compatibility (PS) -46639 + (NN) -26246 + (LL) 4408
1D Compatibility (HY) -31600 + (ID) 9250
Total energy: -226250.0 ( -64.62 by residue)
QMean score : 0.524
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