Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFFHGVTVTNVDIGARTIALPASSVIGLCDVFTPGAQASAKPNVPVLLTSKKDAAAAFGIGSSIYLACEAIYNRAQ--------AVIVAVGVETAETPEAQASAVIGGISAAGERTGLQALL---DGKSRFNAQPRLLVAPGHSAQQAVATAMDGLAEKLRAIAILDGPNSTDEAAVAYAKNFGSKRLFMVDPGV-QVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNKEIKGVTGTSRPVEFLDGDETCRANLLNNANIATI-IRDDGYRL-WGNRTLSSDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDV--------TEGLRAFMRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA- |
| 1OJ7 Chain:A ((19-408)) | ----------KAGLNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGG--SVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPV--FAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIP--ALLKKLEEHGMTQLGENH---DITLDVSRRIYEAAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75571 for 3183 contacts (-23.7/contact) +
2D Compatibility (PS) -37902 + (NN) -7425 + (LL) 1328
1D Compatibility (HY) 400 + (ID) 1950
Total energy: -121120.0 ( -38.05 by residue)
QMean score : 0.111
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