Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQKGTQFD
4MTR Chain:B ((1-127))
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTR----------VIAFLEDPDGYKVELIQKG----
General information:
TITO was launched using:
RESULT:
Template:
4MTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68316 for 794 contacts (-86.0/contact) +
2D Compatibility (PS) -12674 + (NN) -5865 + (LL) 752
1D Compatibility (HY) -16400 + (ID) 5800
Total energy: -108303.0 ( -136.40 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_4MTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTR-query.scw
PDB file :
Tito_Scwrl_4MTR.pdb
: