Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD
3ERM Chain:A ((30-78))
---------------DQMLELAELLTDVLIKNVPGLSEKHAEDASIYMAKNRAVFAAAFKNNATALSELSEPA-----------
General information:
TITO was launched using:
RESULT:
Template:
3ERM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7661 for 257 contacts (-29.8/contact) +
2D Compatibility (PS) -5376 + (NN) -4514 + (LL) 2248
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -17803.0 ( -69.27 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3ERM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ERM-query.scw
PDB file :
Tito_Scwrl_3ERM.pdb
: