Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAG-DDGCPYLCPG--TPQRPGYLVEALSQVLR-E-----PPHFDSLPWPRAVQMVRDGHRDGLVGA-YGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 2V25 Chain:A ((34-258)) | -----------------IKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYNFS-EPYYQDAIGLLVLKEKK--YKSLADMKGANIGVAQAATTKKAIGEAAKKIGI---DVKFSE-FPDYPSIKAALDAKRVDAFSVDKSILLGYVDD------KSEILPDSFEPQSYGIVTKKD---DPAFAKYVDDFVKEHKN--EIDALAKKWGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77606 for 1722 contacts (-45.1/contact) +
2D Compatibility (PS) -22698 + (NN) -11537 + (LL) 2496
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -115545.0 ( -67.10 by residue)
QMean score : 0.351
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