Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
3R6W Chain:B ((2-211))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDF-----VAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGE--------DSCDEAEQRLLALARS-
General information:
TITO was launched using:
RESULT:
Template:
3R6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117540 for 1562 contacts (-75.2/contact) +
2D Compatibility (PS) -21972 + (NN) -17709 + (LL) 432
1D Compatibility (HY) -25200 + (ID) 9850
Total energy: -191839.0 ( -122.82 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3R6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6W-query.scw
PDB file :
Tito_Scwrl_3R6W.pdb
: