Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYRQPGASQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERSGSGL---LPYSTSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPGSDRFDFAGGTYRWSERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEG--GSR---------------------VNNRALNALFTYRLGGHAFGLGYQRMSGDSGFAYL-----AGTDPYLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNGTFRSDFGNDIDETRLIVSYALPLW |
| 4FRX Chain:B ((7-436)) | ---------------------AGFIEDSKASLTLRNFYINTDNRN-----SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL-----------GTVFPLE-SNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASS---RDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPG-VLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTAR--GDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG---DQDENRLIVSYTLPLL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4323 for 2841 contacts (-1.5/contact) +
2D Compatibility (PS) -36744 + (NN) 6117 + (LL) 1276
1D Compatibility (HY) -34400 + (ID) 9200
Total energy: -77274.0 ( -27.20 by residue)
QMean score : 0.223
|
|
|