Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPTVRVLALLELLQSHGQLSGSELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR |
3SQN Chain:A ((11-55)) | -EKDLLRQIRLLEQLLNVPQLTAKRLAAQIQTTERTVFSDLQYIRSQLPADWSIETDSSGIRLRNQQTNELWSLFLPQSISIQLLKELLFTKELVTTSFLSTSGVSYETLKRHIKKMNQALRDFHLTIQLTTMTIQLIGAESNIRIFYHRLLVPFTHNNYFFDDYSIHEEHYFQFLKQVYSSELTVETEEIFGACWFFINTIRNKANCRVSQFSFDSKDVLFQLYQPSLAKLYASEGIYLQGEESFFAFFCFLESWNYDNVYGETLASALHTHYSQLRKSLQQFVTNLSTEEARPDLIQTNLLDNLLLLFIKYTESPTLSEQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20097 for 244 contacts (-82.4/contact) +
2D Compatibility (PS) -4724 + (NN) -1429 + (LL) 208
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -29042.0 ( -119.02 by residue)
QMean score : 0.729
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