Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA-PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQ--EAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR
2YLN Chain:A ((53-276))---------------------------------------------------------------INNKGTVTVGTE-GTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTAQSLTSNYGEKAKA----AGAQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFF


General information:
TITO was launched using:
RESULT:

Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125870 for 1804 contacts (-69.8/contact) +
2D Compatibility (PS) -23156 + (NN) -6110 + (LL) 6100
1D Compatibility (HY) -800 + (ID) 1450
Total energy: -151286.0 ( -83.86 by residue)
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_2YLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YLN-query.scw
PDB file : Tito_Scwrl_2YLN.pdb: