Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRANGLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 2PYY Chain:A ((11-223)) | -------------------------------------VIPPFVL---SN---LSGFSIDLWRSIATQIGI---ESKLIE-YSSVPELISAIKDN--KVNLGIAAISITAEREQNFDFS-LPIFASGL---QIMVRN------GDIRSIDDLPGKVVATTAGSTAATYLREHHISVLEVPKIEEAYKALQTKKADAVVFDAPVLLFYAANEGK--GKVEIVGSIL--REESYGIILPNN-SPYRKPINQALLNLKENGTYQSLYDKWFDP----------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106966 for 1582 contacts (-67.6/contact) +
2D Compatibility (PS) -21687 + (NN) -5196 + (LL) 5992
1D Compatibility (HY) -8000 + (ID) 1250
Total energy: -137107.0 ( -86.67 by residue)
QMean score : 0.447
|
|
|