Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQPTSPLVLHLPYQSPWEWRQFHQHFALRLLAGVESLGDDHYARSFRANGRPAWFEVRPLAERQVLALSLSPSAHALAAELEARVRRMFDLDSDPAAIARHFAGDPLLGPLVAANPGLRLPVAFDPFEQAVRAIVGQQVTVKAAVTITGRLIQRLGEPLEDLGYDGISHLFPTPAALAQAN---LDGIGMPGKRVQTLQRFAAAIASGELSLDLADGPEALVERLCALPGIGPWTAEYIALRAMGEADAFPAADLGLLKSTVWGPQGIDARSLKARAEAWRPWRAYAAIHLWHHYAAGG
3D4V Chain:B ((4-273))-----------LNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIV------NGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPE---YICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDY-LIKQRF---PGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQP


General information:
TITO was launched using:
RESULT:

Template: 3D4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165325 for 2187 contacts (-75.6/contact) +
2D Compatibility (PS) -28562 + (NN) -15949 + (LL) 652
1D Compatibility (HY) -22800 + (ID) 5250
Total energy: -237234.0 ( -108.47 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3D4V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D4V-query.scw
PDB file : Tito_Scwrl_3D4V.pdb: