Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSF------GRMALASALICVCMAAL----GWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRG--NRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
| 4U8U Chain:M ((3-224)) | TYKDRRFQYILTNQHLFIDKLERDLHEIDDEFK---------KLGSD-VKDQTVRHLKARISNLEGDDCKEHEAPCGGDVPQCISDLFFCDGHKDCKNGRDE----------------DKEVCSEVPADIGSSFA--------------------GVVSWQACEEATPHHAVVTITANERKEFFKPRIWVRAILAFEEEEHE----------HHIKTFQLRGYYSFGDRTLALGPERG---------------------------TKPVYGVRCHFDRGDDDHADCQIVNPASLFVCGNFAAERH----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126187 for 1341 contacts (-94.1/contact) +
2D Compatibility (PS) -20946 + (NN) 4702 + (LL) 8212
1D Compatibility (HY) 3600 + (ID) 1850
Total energy: -132469.0 ( -98.78 by residue)
QMean score : -0.072
|
|
|