Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPFATIPATERNSAAQHQDPSPMSQPFDLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDV-VLVDMAWKL-NRNVKVFSLDTGR-LHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLA---GVRAWATGQRRDQSPGTRSQVAVLEIDGAFSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLISKA |
1GPM Chain:A ((228-415)) | ------------------------------------------------------DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDR-FLSALA--GEN-DPEAKRKIIGRVF-VEVFDEEALKLEDVKWLAQGTIYPDVIESAA----------------KMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68051 for 1117 contacts (-60.9/contact) +
2D Compatibility (PS) -17010 + (NN) -4920 + (LL) 4524
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -92507.0 ( -82.82 by residue)
QMean score : 0.356
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