Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAQLIDGKAIAANLRQQIAQRVT--ERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRL--AQRMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR--DLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADG------RLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD
4CJX Chain:B ((25-309))--AVVIDGRAVAKAIQKELTEEVALLERRYKGRR-PGLSTIICGKRKDSQTYVRLKRKAAAACGFRNFSVELPANVTQEALEREVIRLNEEEACHSIVVQLPLPPHIDKVAALSKIKPEKDADCLLPVNVGQLHIRERNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLANEDATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADPSKVPGYRLVGDVCFDVARKRAAYITPVPGGVGPVTVSMLLKNTLTMFKRSVR


General information:
TITO was launched using:
RESULT:

Template: 4CJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207244 for 2354 contacts (-88.0/contact) +
2D Compatibility (PS) -29829 + (NN) -14259 + (LL) 452
1D Compatibility (HY) -20800 + (ID) 6600
Total energy: -278280.0 ( -118.22 by residue)
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_4CJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CJX-query.scw
PDB file : Tito_Scwrl_4CJX.pdb: