Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLAGSFAALFLSLSAQAADCTFTQLEIVPQFGSPNMFGGEDEHVRVMFSNEDPNDDNPDAFPEPPVYLADRDSGNDCRIEDGGIWSRGGVFLSQDGRRVLMHEFSGSSAELVSYDSATCKV--VHRE-DISGQRWAVDKDGLRLGQKCSGESVDSCAKIVKRSLAPFCQTAKK |
2HQS Chain:A ((312-372)) | --------------------------------------------------------------------------------------QNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3329 for 341 contacts (-9.8/contact) +
2D Compatibility (PS) -6251 + (NN) -3495 + (LL) 3632
1D Compatibility (HY) -800 + (ID) 500
Total energy: -10743.0 ( -31.50 by residue)
QMean score : 0.210
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