Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3B4P Chain:B ((37-185))
-------------VAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLPS
General information:
TITO was launched using:
RESULT:
Template:
3B4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28268 for 991 contacts (-28.5/contact) +
2D Compatibility (PS) -16052 + (NN) -6513 + (LL) 688
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -70345.0 ( -70.98 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3B4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B4P-query.scw
PDB file :
Tito_Scwrl_3B4P.pdb
: