Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MAFDA-ARYVHRY--------YASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLDTTALHLGFYLANWGMFRGSSGLLQNSNLDLMKALA--RQLFSGAGPELFELSLVDFAGNGARLAHNRKLLETVLGSMDALSSR-------VSWTDTLKSKILLG----------------VWGEFPALDRHYVAACRALYPRRGLTSVNG---GTLTALHRLIGEERLSFPRLETARKGLLY----PTGRLADMAFFQYGLENA |
| 1LUA Chain:A ((1-287)) | SKKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVFDAEEIYKLAKEMA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52188 for 1755 contacts (-29.7/contact) +
2D Compatibility (PS) -23886 + (NN) -2427 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 1400
Total energy: -75501.0 ( -43.02 by residue)
QMean score : 0.171
|
|
|