Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDGKRLHISEEDAQRLVVAGAEDQRRHLMADD------------------------------------------------------------------ |
4AV9 Chain:A ((14-338)) | SNPIVDYEFNQDQSCLIVSTPKSFDIYNVHPLKRIMSQEMPDAGTIRMLHRTNYIAFVSTKKELLHIWDDVKKQDITRVKLDAAVKDLFLSREFIVVSQGDVISIFKFGNPWNKITEDIKFGGVCEFANGLLVYSNEFNLGQIHVTRLQTDAEQVVGKGVLVKAHANPVKMVRLNRKGDMVATCSQDGTLIRVFQTDNGVLVREFRRGLDRTSIIDMRWSPD-GSKLAVVS-DKWTLHVFE-------VFNDAENKRHVLKDWINSEWSICNFKLKVSKGSNDCKIAWISDTGLVIVWPNRRLADTFKLNYNDDEHVWWLQLNQRNEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2849 for 336 contacts (8.5/contact) +
2D Compatibility (PS) -7116 + (NN) -2539 + (LL) 1108
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -11698.0 ( -34.82 by residue)
QMean score : 0.508
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