Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLPADG------SAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGR------SDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDG--GFR--------------------ELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYI-----AGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVR--SNFANDLDENRLILSYSLALW |
| 4FRX Chain:B ((7-436)) | ------------------------AGFIEDSKASLTLRNFYINTDNRN----SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL---------------GTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQI-GPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKI-KTARGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG-----DQDENRLIVSYTLPLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9261 for 2741 contacts (-3.4/contact) +
2D Compatibility (PS) -35879 + (NN) 4246 + (LL) 908
1D Compatibility (HY) -34000 + (ID) 8650
Total energy: -82636.0 ( -30.15 by residue)
QMean score : 0.245
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