Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYAIAEDTLPARVLKELLLYRRRYPEHRQSASEADEIRRIEQVQLPRIAAFIEAGEPIEFVLPAFPAKSPNPGKVLDSRPDMAERLSLSFLNHLCQRIQLFYAPGAKITVCSDGRVFGDLVRIGDAHISAYQDALRLMIEEIGATHIGVFNLEDVRAFEAQRDNH--EQLRQLLIGGYAEPLESIRETLLASEEGLLLYRAITRF--LYEDGLTPDYQGSKTALQRDAKERAYGVIQRSWAWGALLADQFPRAIRLSIHPQPADSLKFGIHMMPTRDDWLTPWHGVAVNTEDRFVLMKRSEVLELGGELVQINGQPSHYRLPARAARRAAVA |
| 1HD2 Chain:A ((1-161)) | --------------------------------------------------------------APIKVGDAIPAVEVFEGEPGNKVNLAELFKG--KKGVLFGVPGAFTPGCSKT------------HLPGFVEQAEALKAK-GVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDG----------IVKALNVEPDGTGLTCSLAPNIISQL------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32768 for 1280 contacts (-25.6/contact) +
2D Compatibility (PS) -16430 + (NN) -3855 + (LL) 13504
1D Compatibility (HY) -800 + (ID) 1250
Total energy: -41599.0 ( -32.50 by residue)
QMean score : 0.315
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