Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
2I2J Chain:A ((1-21))
---SGSLSTFFRLFNRSFTQALGK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2I2J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1616 for 82 contacts (19.7/contact) +
2D Compatibility (PS) -2400 + (NN) -1099 + (LL) 2464
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -869.0 ( -10.60 by residue)
QMean score : -0.059
(partial model without unconserved sides chains):
PDB file :
Tito_2I2J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I2J-query.scw
PDB file :
Tito_Scwrl_2I2J.pdb
: