Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHGCFTICRKFSLALAILALAGCSYFFAPRVELQRLTLDVAARANDD-----SPIAVDFVAVKDAELFKELAGLPASQWFANREQYRRDYRQQ-FAVWSLELVPGQFIESESFPLRGDRATGLLVFAGYNTPGAH----R--LRLDQQQ---RVWLRLDTREMRLVNDPATR
3RX9 Chain:A ((22-151))
-----------------------------QIKTL-HLDIRAREAINTSAAGIPLSVVVRIYQL------KDNRSFDSADYQALFTGDNEILAGDIIAQKDVWLQPGGSVAVDMPLDDAAKFTG--VAAMFLEPDQKKNTWRVVLGRDELEPDTPRLIEVSGNTLTLLP-----
General information:
TITO was launched using:
RESULT:
Template:
3RX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47093 for 772 contacts (-61.0/contact) +
2D Compatibility (PS) -12149 + (NN) -2569 + (LL) 3848
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -62913.0 ( -81.49 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_3RX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RX9-query.scw
PDB file :
Tito_Scwrl_3RX9.pdb
: