Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQ----GRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVA---PPEGGYSIERGAKVYAAQCAICHGADGQGQM-ALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERP--QDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 4WQ8 Chain:A ((5-237)) | -------------------------TVALTVPAAALLPDGALGESIVRGRRYLSDTPAQLPDFVGNGLACRHCHPGRDGEVGTEANAAPFVGVVGRFPQYSARHGRLITLEQRI-GDFERSLNGRALALDHPALIDMLAYMSWLSQGVPVGAVVAGHGIPTLTLEREPDGVH----GEALYQARCLACHGADGSGTLDADGRYLFPPLWGPRSFNTGAGMNRQATAAGFIKHKM-------LSDEEAWDVAGFVLTHPRPLF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52118 for 1683 contacts (-31.0/contact) +
2D Compatibility (PS) -22690 + (NN) -10609 + (LL) 3908
1D Compatibility (HY) -12000 + (ID) 4550
Total energy: -98059.0 ( -58.26 by residue)
QMean score : 0.498
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