Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
4TLF Chain:B ((5-197))
----LRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSK----
General information:
TITO was launched using:
RESULT:
Template:
4TLF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94113 for 1460 contacts (-64.5/contact) +
2D Compatibility (PS) -21440 + (NN) -17978 + (LL) 384
1D Compatibility (HY) -24400 + (ID) 9650
Total energy: -167197.0 ( -114.52 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4TLF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TLF-query.scw
PDB file :
Tito_Scwrl_4TLF.pdb
: