Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD
2OBA Chain:D ((22-138))
-ELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD
General information:
TITO was launched using:
RESULT:
Template:
2OBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71808 for 812 contacts (-88.4/contact) +
2D Compatibility (PS) -12693 + (NN) -7422 + (LL) 208
1D Compatibility (HY) -16000 + (ID) 5850
Total energy: -113565.0 ( -139.86 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2OBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OBA-query.scw
PDB file :
Tito_Scwrl_2OBA.pdb
: