Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MNLKPQTLMVAIQCVAAR---TRELDAQLQNDDPQNAAELEQLL---VGYDLAA-----DDLKNAYEQALGQYSGLPP--YDRLIEEPAS--------------
2Q97 Chain:T ((1-109))
MQQELGLLRPEERLIAGQAKAAALQTVHQLGAVALTPEQAKAALLDEILRATQNLDLRKYENLNTEQQKAYEQVQRDLSQLSPETKALLIENQRKEKTLLEKARKLFQR
General information:
TITO was launched using:
RESULT:
Template:
2Q97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3935 for 264 contacts (14.9/contact) +
2D Compatibility (PS) -8462 + (NN) -4544 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -11871.0 ( -44.97 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_2Q97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q97-query.scw
PDB file :
Tito_Scwrl_2Q97.pdb
: