Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLFATGLAASFLLLPPAQAAPPAPYGVQPHQQAVQRAGEQRQRQLQEQRQRFDEQRLQLQQDQLQRQQQNLQRQRQQRQMQDNLIRQQQLDQQRWRLEQDQRRLDSERRQLENRRRQSQSPAIR
1AG2 Chain:A ((124-226))
---------GLGGYMLGSAMSRPMIHFG-----------NDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFT---ETDVKMMERVVEQMCVTQYQKESQAYY
General information:
TITO was launched using:
RESULT:
Template:
1AG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 58410 for 725 contacts (80.6/contact) +
2D Compatibility (PS) -10719 + (NN) -5212 + (LL) 2544
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 40923.0 ( 56.45 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_1AG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AG2-query.scw
PDB file :
Tito_Scwrl_1AG2.pdb
: