Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATP-RYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQG--LALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLA------HALPERSLRMAFCAFLALCAVLLLVRG---------------- |
| 4I17 Chain:A ((4-226)) | TTD------------------------------------PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---SVTAYNCGVCADNIK------KYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG-----NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146803 for 1556 contacts (-94.3/contact) +
2D Compatibility (PS) -21284 + (NN) -8838 + (LL) 3104
1D Compatibility (HY) -800 + (ID) 1400
Total energy: -176021.0 ( -113.12 by residue)
QMean score : 0.197
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