Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSEV---RGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQI---PPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQ---GIPTSACGEGA--YKVNGVSY--YSWSGSS----------------PLTNFLDPSDAFLGASSLTFKNGTA--NDGLVGTCSSHLGMVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL |
| 2ES4 Chain:B ((1-315)) | -------------------------ADTYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFVQDVLKTDPTGLSSTVIAAFVNVFGTLV---SSSHNTDQDALAALRTLTTAQTATYNRNFPSAGLGAPGS-CQTGAATETVGGSQHLLYSWGGTAIQPTSTGATDTSTGTLDVANVTDPSTLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQLLGVRGANAEDPVAVIRTHVNRLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ES4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71317 for 2508 contacts (-28.4/contact) +
2D Compatibility (PS) -29853 + (NN) -7666 + (LL) 2664
1D Compatibility (HY) -22400 + (ID) 6350
Total energy: -134922.0 ( -53.80 by residue)
QMean score : 0.450
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