Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLAG
3OZB Chain:D ((16-258))
-SVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHG----FPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLA-
General information:
TITO was launched using:
RESULT:
Template:
3OZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179827 for 1985 contacts (-90.6/contact) +
2D Compatibility (PS) -26749 + (NN) -16312 + (LL) 84
1D Compatibility (HY) -31600 + (ID) 11950
Total energy: -266354.0 ( -134.18 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3OZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZB-query.scw
PDB file :
Tito_Scwrl_3OZB.pdb
: