Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYGSLRIAGLYRVRYDRTPEPQPLATLGE--MPALDADDLLVRTCLERGELVSVRQELLER-G-EQRAHSALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 1VHM Chain:A ((43-179)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFLATLANTSALLYERLTDINWAGFYLLEDDT-L--VLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDAASNSEIVLPLVV-KNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKF-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112755 for 1024 contacts (-110.1/contact) +
2D Compatibility (PS) -14231 + (NN) -4647 + (LL) 25832
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -114201.0 ( -111.52 by residue)
QMean score : 0.343
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