Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLQRGFTLLELLIAIAIFALLALATY--RMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNPLGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLLDPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE |
4DX8 Chain:H ((13-202)) | ---------EDAYVAVIRPKSLNSREYRAKSYEILLHEVPKKVLLETKLQS----------EITQGILDYVVET--------------------TKPINQGIRGKRVVLMKKFPLDGEKMGREASLFIVPSVVCPIFYCLQDIMRVCT---------------HFA-------TLTARMLIALDKWLDERHAQS-HFIPALFRPSPLERIKTNVINPAYAT------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44564 for 1057 contacts (-42.2/contact) +
2D Compatibility (PS) -16546 + (NN) -4738 + (LL) 3512
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -68936.0 ( -65.22 by residue)
QMean score : 0.140
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