Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITALPSADGQELTIQIQGRFDFGAHQDFRDAYERV-AIT-PRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS
1H4X Chain:A ((2-99))
-AFQLEM-VTRETVVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTILLNPSPTMRKVFQFSGLGPWM---
General information:
TITO was launched using:
RESULT:
Template:
1H4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75561 for 681 contacts (-111.0/contact) +
2D Compatibility (PS) -10083 + (NN) -3125 + (LL) 420
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -96049.0 ( -141.04 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_1H4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H4X-query.scw
PDB file :
Tito_Scwrl_1H4X.pdb
: