Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATSDLIESLISYSWDDWQVTRQEARRVIAAIRNDNVPDATIAALDKSGSLIKLFQRVGPPELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADLADAAGRLGFAAAGATGVASQAIQGPFSGVGATGVNPTDLPSIAFGDQLKLLNKDPATVTKYSNPLGDLGAYLSQLSPQDKLNQAQTLVGQPISTLFPDAYPGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDEDAKDYQAAVSIKSANTSIGLGQVVVSTAIKYELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQDLRKLPKTRGAFPSIDLRAYAGNPRNWPRDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPGMRFP |
1QSA Chain:A ((454-542)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDLFKRYTSGKEIPQSYAMAIARQESA---WNPK------VK---SPVGASGLMQIMPGTATHTV---------KMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34889 for 656 contacts (-53.2/contact) +
2D Compatibility (PS) -9070 + (NN) -48 + (LL) 16392
1D Compatibility (HY) 0 + (ID) 800
Total energy: -28415.0 ( -43.32 by residue)
QMean score : 0.485
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