Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQW-G-DWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLRED-----SGQWQDTNIEALNWSFET-TLLNAHAGVAQRFSEYRTDLDELAPE-DKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGG-GKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLR----EDYDASLVYHKFWRVDDDSDIGTSGINA-ALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYG-PGTDSTMHRAFVDFIWRF |
| 3SY9 Chain:A ((13-417)) | ---------------------------------------SSLQLLTRNYYFNHDRR---------SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL------------------YESGKAPDEFSSGGAALKIRA----FDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYN---------DSHHLS--WLGGTWGGIEGFTSSLYAAELQN--------------------VWKQYYADVDYTYEI-DDNWSLNPGAHYYKTVDSGDSL-------------LGRIDNNTYSLHFAVGY---RQHTVTAVLQKVNGNTP------FD--YINQ---GDSI-FLDNSQQY--SDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPA----------KDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDY---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 58233 for 2624 contacts (22.2/contact) +
2D Compatibility (PS) -35572 + (NN) -4877 + (LL) 5884
1D Compatibility (HY) 400 + (ID) 1950
Total energy: 22118.0 ( 8.43 by residue)
QMean score : 0.017
|
|
|