Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA
1FSD Chain:? ((1-28))
---------------QQYTAKIKGRTFRNEKELRDFIEKFKGR---------------
General information:
TITO was launched using:
RESULT:
Template:
1FSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 417 for 140 contacts (3.0/contact) +
2D Compatibility (PS) -2821 + (NN) 220 + (LL) 2044
1D Compatibility (HY) -400 + (ID) 400
Total energy: -940.0 ( -6.71 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1FSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FSD-query.scw
PDB file :
Tito_Scwrl_1FSD.pdb
: