Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNPVLPEQAQEALDAF-----GHTASWEQRARLLLQWGE-RLAPLAEHERQEEHRVHGCESLVWLLGEQRDGHWRFRADSDARLIRGLLAVLL--ARVDGIETRELARLDLNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG
1WK0 Chain:A ((1-137))
GSSGSSGDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPR------------ISGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1WK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20555 for 734 contacts (-28.0/contact) +
2D Compatibility (PS) -12861 + (NN) 2464 + (LL) 988
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -31764.0 ( -43.28 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1WK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WK0-query.scw
PDB file :
Tito_Scwrl_1WK0.pdb
: