Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------MSLNTPRNKPSRTETEAVAASSGRSAVGRRDYTEQLRRAARRNAWDLYGEHFY
2RNM Chain:A ((217-295))
MKIDAIVGRNSAKDIRTEERARVQLGNVVTAAALHGGIRISDQTTNSVETVVGKGESRVLIGNEYGGKGFWDNHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2RNM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9000 for 210 contacts (42.9/contact) +
2D Compatibility (PS) -5207 + (NN) -2774 + (LL) 0
1D Compatibility (HY) 2800 + (ID) 200
Total energy: 3619.0 ( 17.23 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_2RNM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RNM-query.scw
PDB file :
Tito_Scwrl_2RNM.pdb
: