Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRTLAFVSTLLLAAFCALPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKHYREQRITLKNKRQVNPLPEDLKRIERELAEQTAAYRRFSPGLPSNLMLDKPVDGP-LSSPFGLRRFF-NGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKID--VKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIFIGAFQP |
4RNY Chain:B ((189-317)) | -------------------------------------------------------------------------------------------------------------------------------------------------------FLLETPVKYTRISSPFSYGRFHPVLKVRRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEI-HLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVG----STGPHLHFGVYKNSRPINPLGYI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77242 for 912 contacts (-84.7/contact) +
2D Compatibility (PS) -12828 + (NN) -3565 + (LL) 9740
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -93995.0 ( -103.06 by residue)
QMean score : 0.566
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