Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4HR2 Chain:B ((6-145))
-ALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNVYSR--
General information:
TITO was launched using:
RESULT:
Template:
4HR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45591 for 1092 contacts (-41.8/contact) +
2D Compatibility (PS) -14730 + (NN) -2157 + (LL) 512
1D Compatibility (HY) -15600 + (ID) 4950
Total energy: -82516.0 ( -75.56 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_4HR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR2-query.scw
PDB file :
Tito_Scwrl_4HR2.pdb
: