Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGH--TLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTD--IFELQEKMQSAGLPV
2V1U Chain:A ((90-202))
-------ETPYRVASAIAEAVGVRVPF-TGLSVGEVYERLVKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRINQEL-------VSLVGITNSLGFVENL-EPRVKSSLGEVELVFPPYT-------
General information:
TITO was launched using:
RESULT:
Template:
2V1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39928 for 681 contacts (-58.6/contact) +
2D Compatibility (PS) -10605 + (NN) 1751 + (LL) 1380
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -51052.0 ( -74.97 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2V1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V1U-query.scw
PDB file :
Tito_Scwrl_2V1U.pdb
: