Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTDMTAQKHLLRAGIMNLVMYARGMS--DSKLRALGASHSRAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
3UBC Chain:A ((4-131))
-KEKELIKESWKRIEPNKNEIGLLFYANLFKEEPTVSVLFQN-PISSQSRKLMQVLGILVQGIDNLEGLIPTLQDLGRRHKQ--YGVVDSHYPLVGDCLLKSIQEYLGQGFTEEAKAAWTKVYGIAAQVMTA--
General information:
TITO was launched using:
RESULT:
Template:
3UBC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69522 for 857 contacts (-81.1/contact) +
2D Compatibility (PS) -13373 + (NN) -7385 + (LL) 732
1D Compatibility (HY) -8400 + (ID) 1300
Total energy: -99248.0 ( -115.81 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3UBC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UBC-query.scw
PDB file :
Tito_Scwrl_3UBC.pdb
: