Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLHAAAVGPSVLPDLREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALMARELPELDLYHPWSLSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAG----GVHNLFVSHGDEDQAALIRRMERGLLVTELMGQGV--NLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHTGSVLVESMMVAGR |
| 1VL4 Chain:A ((2-433)) | --------------TFEEFKDRLFALAKKNGV-EVQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGKTGTFRTQVLEN--PEKCFEEALSNLQVKKEYFFEGGKEYREM-----ETYVGRFEKLSVKEKMDMAKKAHESAAKDER-VVMVPTVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIA-RDANPRSGSWYELARTPEDL-NPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRNTALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGMHAGANSISGEFSLFAKGYWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQHTIAPSVLVEVLDVA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -196782 for 3591 contacts (-54.8/contact) +
2D Compatibility (PS) -44436 + (NN) -6154 + (LL) 1832
1D Compatibility (HY) -21200 + (ID) 5650
Total energy: -272390.0 ( -75.85 by residue)
QMean score : 0.422
|
|
|