Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLN-FTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFL-ISNPYIEFAYDGSKMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTAITLTGSSQYTAQAELVNSSGN-PDPIRAAMIGLKNGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
4F3V Chain:A ((1-275)) | -----------------------------GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGS--------------EHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL------ALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN--------------ESAAVALLEWLQTTHPEPKVAAALK---------DPSYRLKTTTAEQIA--SRADPWDPGSVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20048 for 2272 contacts (-8.8/contact) +
2D Compatibility (PS) -28637 + (NN) -9598 + (LL) 4356
1D Compatibility (HY) -400 + (ID) 2500
Total energy: -56827.0 ( -25.01 by residue)
QMean score : 0.132
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